R. Bellman, On the approximation of curves by line segments using dynamic programming, Communications of the ACM, vol.4, issue.6, p.284, 1961.
DOI : 10.1145/366573.366611

L. Boysen, Consistencies and rates of convergence of jump-penalized least squares estimators, The Annals of Statistics, vol.37, issue.1, pp.157-183, 2009.
DOI : 10.1214/07-AOS558

J. Darbon and M. Sigelle, Image Restoration with Discrete Constrained Total Variation Part I: Fast and Exact Optimization, Journal of Mathematical Imaging and Vision, vol.2, issue.4, pp.261-276, 2006.
DOI : 10.1007/s10851-006-8803-0

J. Darbon and M. Sigelle, Image Restoration with Discrete Constrained Total Variation Part II: Levelable Functions, Convex Priors and Non-Convex Cases, Journal of Mathematical Imaging and Vision, vol.39, issue.4, pp.277-291, 2006.
DOI : 10.1007/s10851-006-0644-3

J. R. Dixon, Topological domains in mammalian genomes identified by analysis of chromatin interactions, Nature, vol.148, issue.7398, pp.376-380, 2012.
DOI : 10.1038/nature11082

J. Fraser, Chromatin conformation signatures of cellular differentiation, Genome Biology, vol.10, issue.4, 2009.
DOI : 10.1186/gb-2009-10-4-r37

Z. Harchaoui and C. Leduc, Multiple Change-Point Estimation With a Total Variation Penalty, Journal of the American Statistical Association, vol.105, issue.492, pp.1480-1493, 2010.
DOI : 10.1198/jasa.2010.tm09181

URL : https://hal.archives-ouvertes.fr/hal-00923474

D. S. Hochbaum, An efficient algorithm for image segmentation, Markov random fields and related problems, Journal of the ACM, vol.48, issue.4, pp.686-701, 2001.
DOI : 10.1145/502090.502093

R. Killick, Optimal Detection of Changepoints With a Linear Computational Cost, Journal of the American Statistical Association, vol.63, issue.500, pp.1590-1598, 2012.
DOI : 10.1080/01621459.2012.737745

M. Lavielle, Using penalized contrasts for the change-point problem, Signal Processing, vol.85, issue.8, pp.1501-1510, 2005.
DOI : 10.1016/j.sigpro.2005.01.012

URL : https://hal.archives-ouvertes.fr/inria-00070662

E. Lieberman-aiden, Comprehensive Mapping of Long-Range Interactions Reveals Folding Principles of the Human Genome, Science, vol.326, issue.5950, pp.289-293, 2009.
DOI : 10.1126/science.1181369

E. P. Nora, Spatial partitioning of the regulatory landscape of the X-inactivation centre, Nature, vol.135, issue.7398, pp.381-385, 2012.
DOI : 10.1038/nature11049

J. E. Phillips-cremins, Architectural Protein Subclasses Shape 3D Organization of Genomes during Lineage Commitment, Cell, vol.153, issue.6, pp.1281-1295, 2013.
DOI : 10.1016/j.cell.2013.04.053

F. Picard, A statistical approach for array CGH data analysis, BMC Bioinformatics, vol.6, 2005.
URL : https://hal.archives-ouvertes.fr/hal-00427846

G. Rigaill, Pruned dynamic programming for optimal multiple change-point detection, ArXiv, pp.1004-0887, 2010.